BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015G09SP1|AL426907
(971 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1621 1879 0.0
>3x_Contig1621
Length = 10398
Score = 1879 bits (944), Expect = 0.0
Identities = 964/972 (99%), Gaps = 2/972 (0%)
Strand = Plus / Plus
Query: 1 atgctattgatagataccagawaaactttagcagactagaggaatcggttagctctatca 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5025 atgctattgatagataccagaaaaactttagcagactagaggaatcggttagctctatca 5084
Query: 61 gtttctccaaagcttctaagttgcaacagaaatatgatgcatatcaggaatctcaaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5085 gtttctccaaagcttctaagttgcaacagaaatatgatgcatatcaggaatctcaaaaga 5144
Query: 121 aaaggcgatatagtgttgatttcgatgcaacgcccgacgtgcctataggagatgaggacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5145 aaaggcgatatagtgttgatttcgatgcaacgcccgacgtgcctataggagatgaggacg 5204
Query: 181 atgttgatataatatccaatgttgaagcaattaatgacaacgattctttgaaggagctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5205 atgttgatataatatccaatgttgaagcaattaatgacaacgattctttgaaggagctcc 5264
Query: 241 gccaaaggcttatgggtaaaagaagggacagcgctgatacggagggtgaatcatttgaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5265 gccaaaggcttatgggtaaaagaagggacagcgctgatacggagggtgaatcatttgaca 5324
Query: 301 aacaaatgcaaattcaggatgatcttcagaaggaactggnttgaagacatgtcccagcta 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5325 aacaaatgcaaattcaggatgatcttcagaaggaactgg-ttgaagacatgtcccagcta 5383
Query: 361 gtttcaggcttaagacaaggtgcggaagctttccagaatgctatcgaacacgactctact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5384 gtttcaggcttaagacaaggtgcggaagctttccagaatgctatcgaacacgactctact 5443
Query: 421 gttcttaaggcagcagaaatcggattgcatgttacttctaagagcctttcttcactcgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5444 gttcttaaggcagcagaaatcggattgcatgttacttctaagagcctttcttcactcgga 5503
Query: 481 tccagattgamaaagtatcacaatgaaaaamttggatttttaatgaagttaggactttta 540
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5504 tccagattgaaaaagtatcacaatgaaaaaattggatttttaatgaagttaggactttta 5563
Query: 541 tcgtttattataattggtctattggtcacctatcttgtaataaaagtatttccagattta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5564 tcgtttattataattggtctattggtcacctatcttgtaataaaagtatttccagattta 5623
Query: 601 tgagtgtcttccgctaaaatctccaagatttagataaaggctctgcttcactcaamagct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5624 tgagtgtcttccgctaaaatctccaagatttagataaaggctctgcttcactcaaaagct 5683
Query: 661 tcamagtacaaaatagactcatgaatattcgatgaaattaattgataccgtttccactta 720
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5684 tcaaagtacaaaatagactcatgaatattcgatgaaattaattgataccgtttccactta 5743
Query: 721 tcgaatagattgattctattgattgtcttatctataattgcatattatacacttgtttaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5744 tcgaatagattgattctattgattgtcttatctataattgcatattatacacttgtttaa 5803
Query: 781 aattgacaggcacttatattgttataggactattgactacagaacatcaaacattaaatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5804 aattgacaggcacttatattgttataggactattgactacagaacatcaaacattaaatc 5863
Query: 841 agctttattaccaacatcactgacaaattctctactatcaccggctaataattctcttct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5864 agctttattaccaacatcactgacaaattctctactatcaccggctaataattctcttct 5923
Query: 901 gatttcaggtccaatttctttgtgacctctttgacgaacagtttcaagtagg-aatctct 959
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5924 gatttcaggtccaatttctttgtgacctctttgacgaacagtttcaagtaggaaatctct 5983
Query: 960 ttgatcttkggt 971
|||||||| |||
Sbjct: 5984 ttgatcttgggt 5995
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7131
Number of Sequences: 1807
Number of extensions: 7131
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)